Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC024243.1-201ENST00000609234 778 ntBASIC19.14■□□□□ 0.65
CDH4P55283 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH4P55283 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
CDH4P55283 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH4P55283 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH4P55283 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 FAM8A6P-201ENST00000407496 1135 ntBASIC19.13■□□□□ 0.65
CDH4P55283 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 AC092647.4-201ENST00000457211 535 ntBASIC19.13■□□□□ 0.65
CDH4P55283 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH4P55283 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH4P55283 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH4P55283 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH4P55283 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH4P55283 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CDH4P55283 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDH4P55283 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH4P55283 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH4P55283 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH4P55283 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDH4P55283 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH4P55283 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDH4P55283 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH4P55283 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.12■□□□□ 0.65
CDH4P55283 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDH4P55283 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH4P55283 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH4P55283 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH4P55283 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CDH4P55283 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDH4P55283 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH4P55283 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH4P55283 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 SEC1P-202ENST00000473944 940 ntBASIC19.12■□□□□ 0.65
CDH4P55283 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH4P55283 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH4P55283 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH4P55283 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH4P55283 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH4P55283 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH4P55283 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH4P55283 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDH4P55283 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDH4P55283 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CDH4P55283 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH4P55283 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDH4P55283 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDH4P55283 KRT18P41-201ENST00000518924 1277 ntBASIC19.11■□□□□ 0.65
CDH4P55283 AC104390.1-201ENST00000555663 520 ntBASIC19.11■□□□□ 0.65
CDH4P55283 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.11■□□□□ 0.65
CDH4P55283 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CDH4P55283 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH4P55283 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH4P55283 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms