Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.73□□□□□ -0.21
APOC4P55056 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 GCSHP2-201ENST00000560971 527 ntBASIC13.73□□□□□ -0.21
APOC4P55056 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.73□□□□□ -0.21
APOC4P55056 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.73□□□□□ -0.21
APOC4P55056 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
APOC4P55056 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 AC112497.1-201ENST00000624824 639 ntBASIC13.73□□□□□ -0.21
APOC4P55056 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
APOC4P55056 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOC4P55056 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC4P55056 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC4P55056 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC4P55056 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC4P55056 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC4P55056 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC4P55056 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC4P55056 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 AL121956.5-201ENST00000625261 221 ntBASIC13.72□□□□□ -0.21
APOC4P55056 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOC4P55056 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
APOC4P55056 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOC4P55056 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC4P55056 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC4P55056 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC4P55056 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC4P55056 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC4P55056 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOC4P55056 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
APOC4P55056 AL032819.2-201ENST00000624543 2162 ntBASIC13.71□□□□□ -0.21
APOC4P55056 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC4P55056 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms