Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR2JP52435 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
POLR2JP52435 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2JP52435 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.92■□□□□ 0.46
POLR2JP52435 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
POLR2JP52435 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 POU5F1P3-201ENST00000428824 1078 ntBASIC17.92■□□□□ 0.46
POLR2JP52435 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.92■□□□□ 0.46
POLR2JP52435 Z85996.1-201ENST00000494644 937 ntBASIC17.92■□□□□ 0.46
POLR2JP52435 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.92■□□□□ 0.46
POLR2JP52435 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.92■□□□□ 0.46
POLR2JP52435 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
POLR2JP52435 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
POLR2JP52435 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
POLR2JP52435 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2JP52435 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR2JP52435 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
POLR2JP52435 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.92■□□□□ 0.46
POLR2JP52435 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR2JP52435 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR2JP52435 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
POLR2JP52435 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
POLR2JP52435 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR2JP52435 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 KRT8P32-201ENST00000512863 1461 ntBASIC17.91■□□□□ 0.46
POLR2JP52435 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR2JP52435 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.91■□□□□ 0.46
POLR2JP52435 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
POLR2JP52435 MYC-208ENST00000641036 567 ntBASIC17.91■□□□□ 0.46
POLR2JP52435 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
POLR2JP52435 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
POLR2JP52435 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2JP52435 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR2JP52435 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR2JP52435 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
POLR2JP52435 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.9■□□□□ 0.46
POLR2JP52435 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.9■□□□□ 0.46
POLR2JP52435 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR2JP52435 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 AC008403.3-201ENST00000598924 454 ntBASIC17.9■□□□□ 0.46
POLR2JP52435 AC008764.6-201ENST00000595909 2069 ntBASIC17.9■□□□□ 0.46
POLR2JP52435 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR2JP52435 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
POLR2JP52435 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
POLR2JP52435 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
POLR2JP52435 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2JP52435 AP000997.3-201ENST00000623333 2250 ntBASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms