Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN3P51790 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCN3P51790 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN3P51790 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN3P51790 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN3P51790 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN3P51790 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN3P51790 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN3P51790 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLCN3P51790 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCN3P51790 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLCN3P51790 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.56■□□□□ 0.88
CLCN3P51790 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCN3P51790 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCN3P51790 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.56■□□□□ 0.88
CLCN3P51790 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCN3P51790 AL136038.4-201ENST00000603606 1261 ntBASIC20.56■□□□□ 0.88
CLCN3P51790 HEIH-201ENST00000623091 1652 ntBASIC20.56■□□□□ 0.88
CLCN3P51790 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCN3P51790 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.56■□□□□ 0.88
CLCN3P51790 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLCN3P51790 AL391807.1-203ENST00000604392 2365 ntBASIC20.56■□□□□ 0.88
CLCN3P51790 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCN3P51790 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN3P51790 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN3P51790 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN3P51790 AL357033.4-201ENST00000617703 1807 ntBASIC20.55■□□□□ 0.88
CLCN3P51790 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLCN3P51790 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLCN3P51790 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCN3P51790 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN3P51790 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN3P51790 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CLCN3P51790 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN3P51790 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 HLA-F-220ENST00000434407 884 ntBASIC20.55■□□□□ 0.88
CLCN3P51790 KRT18P56-201ENST00000507275 550 ntBASIC20.55■□□□□ 0.88
CLCN3P51790 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN3P51790 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.55■□□□□ 0.88
CLCN3P51790 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN3P51790 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN3P51790 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN3P51790 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN3P51790 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLCN3P51790 MTMR9LP-203ENST00000426597 1545 ntBASIC20.54■□□□□ 0.88
CLCN3P51790 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLCN3P51790 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLCN3P51790 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN3P51790 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCN3P51790 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLCN3P51790 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN3P51790 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN3P51790 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLCN3P51790 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN3P51790 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLCN3P51790 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN3P51790 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CLCN3P51790 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN3P51790 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.54■□□□□ 0.88
CLCN3P51790 Z98044.1-201ENST00000632503 1764 ntBASIC20.54■□□□□ 0.88
CLCN3P51790 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN3P51790 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCN3P51790 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCN3P51790 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLCN3P51790 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCN3P51790 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLCN3P51790 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN3P51790 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN3P51790 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN3P51790 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms