Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RASA4DP-201ENST00000460726 1199 ntBASIC19.83■□□□□ 0.77
LHX1P48742 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LHX1P48742 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.83■□□□□ 0.77
LHX1P48742 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.83■□□□□ 0.77
LHX1P48742 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.83■□□□□ 0.76
LHX1P48742 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.83■□□□□ 0.76
LHX1P48742 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LHX1P48742 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LHX1P48742 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LHX1P48742 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LHX1P48742 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LHX1P48742 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LHX1P48742 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LHX1P48742 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LHX1P48742 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LHX1P48742 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.82■□□□□ 0.76
LHX1P48742 SPDYE15P-201ENST00000424157 909 ntBASIC19.82■□□□□ 0.76
LHX1P48742 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.82■□□□□ 0.76
LHX1P48742 AC112907.2-201ENST00000448639 330 ntBASIC19.82■□□□□ 0.76
LHX1P48742 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.82■□□□□ 0.76
LHX1P48742 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
LHX1P48742 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.82■□□□□ 0.76
LHX1P48742 MIR3917-201ENST00000580971 93 ntBASIC19.82■□□□□ 0.76
LHX1P48742 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
LHX1P48742 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LHX1P48742 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.82■□□□□ 0.76
LHX1P48742 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.82■□□□□ 0.76
LHX1P48742 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
LHX1P48742 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.81■□□□□ 0.76
LHX1P48742 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.81■□□□□ 0.76
LHX1P48742 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.81■□□□□ 0.76
LHX1P48742 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.81■□□□□ 0.76
LHX1P48742 MIR3180-4-201ENST00000582223 153 ntBASIC19.81■□□□□ 0.76
LHX1P48742 AL121956.5-201ENST00000625261 221 ntBASIC19.81■□□□□ 0.76
LHX1P48742 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.81■□□□□ 0.76
LHX1P48742 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
LHX1P48742 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.81■□□□□ 0.76
LHX1P48742 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
LHX1P48742 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.81■□□□□ 0.76
LHX1P48742 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LHX1P48742 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LHX1P48742 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.8■□□□□ 0.76
LHX1P48742 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
LHX1P48742 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.8■□□□□ 0.76
LHX1P48742 KRT18P41-201ENST00000518924 1277 ntBASIC19.8■□□□□ 0.76
LHX1P48742 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.8■□□□□ 0.76
LHX1P48742 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.8■□□□□ 0.76
LHX1P48742 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
LHX1P48742 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.8■□□□□ 0.76
LHX1P48742 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.8■□□□□ 0.76
LHX1P48742 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.8■□□□□ 0.76
LHX1P48742 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX1P48742 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.8■□□□□ 0.76
LHX1P48742 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX1P48742 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LHX1P48742 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX1P48742 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX1P48742 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LHX1P48742 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX1P48742 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX1P48742 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX1P48742 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LHX1P48742 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LHX1P48742 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX1P48742 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX1P48742 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.79■□□□□ 0.76
LHX1P48742 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX1P48742 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX1P48742 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX1P48742 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LHX1P48742 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LHX1P48742 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms