Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TM4SF4P48230 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TM4SF4P48230 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.34■■□□□ 1.01
TM4SF4P48230 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.34■■□□□ 1.01
TM4SF4P48230 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TM4SF4P48230 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.34■■□□□ 1.01
TM4SF4P48230 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.34■■□□□ 1.01
TM4SF4P48230 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.34■■□□□ 1.01
TM4SF4P48230 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.34■■□□□ 1.01
TM4SF4P48230 Z83851.2-201ENST00000609564 659 ntBASIC21.34■■□□□ 1.01
TM4SF4P48230 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.34■■□□□ 1.01
TM4SF4P48230 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.34■■□□□ 1.01
TM4SF4P48230 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TM4SF4P48230 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF4P48230 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.33■■□□□ 1.01
TM4SF4P48230 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TM4SF4P48230 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.33■■□□□ 1.01
TM4SF4P48230 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TM4SF4P48230 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TM4SF4P48230 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.33■■□□□ 1.01
TM4SF4P48230 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.33■■□□□ 1.01
TM4SF4P48230 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.33■■□□□ 1.01
TM4SF4P48230 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.33■■□□□ 1.01
TM4SF4P48230 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.33■■□□□ 1.01
TM4SF4P48230 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.33■■□□□ 1.01
TM4SF4P48230 MIR3197-201ENST00000582241 73 ntBASIC21.33■■□□□ 1.01
TM4SF4P48230 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.33■■□□□ 1.01
TM4SF4P48230 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TM4SF4P48230 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.33■■□□□ 1.01
TM4SF4P48230 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TM4SF4P48230 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.33■■□□□ 1
TM4SF4P48230 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.33■■□□□ 1
TM4SF4P48230 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TM4SF4P48230 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.33■■□□□ 1
TM4SF4P48230 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
TM4SF4P48230 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.33■■□□□ 1
TM4SF4P48230 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.33■■□□□ 1
TM4SF4P48230 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.32■■□□□ 1
TM4SF4P48230 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.32■■□□□ 1
TM4SF4P48230 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.32■■□□□ 1
TM4SF4P48230 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.32■■□□□ 1
TM4SF4P48230 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
TM4SF4P48230 HLA-J-201ENST00000462773 1622 ntBASIC21.32■■□□□ 1
TM4SF4P48230 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TM4SF4P48230 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.31■■□□□ 1
TM4SF4P48230 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
TM4SF4P48230 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TM4SF4P48230 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TM4SF4P48230 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
TM4SF4P48230 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TM4SF4P48230 AC073314.1-201ENST00000568729 2216 ntBASIC21.31■■□□□ 1
TM4SF4P48230 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.31■■□□□ 1
TM4SF4P48230 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TM4SF4P48230 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
TM4SF4P48230 RPS2P1-201ENST00000434010 821 ntBASIC21.31■■□□□ 1
TM4SF4P48230 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.31■■□□□ 1
TM4SF4P48230 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
TM4SF4P48230 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.31■■□□□ 1
TM4SF4P48230 RNA5SP415-201ENST00000517246 115 ntBASIC21.31■■□□□ 1
TM4SF4P48230 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.31■■□□□ 1
TM4SF4P48230 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms