Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ZNF444P1-201ENST00000559497 298 ntBASIC17.75■□□□□ 0.43
GABRA4P48169 AL136038.3-201ENST00000561909 1096 ntBASIC17.75■□□□□ 0.43
GABRA4P48169 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.75■□□□□ 0.43
GABRA4P48169 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.75■□□□□ 0.43
GABRA4P48169 AC079602.3-201ENST00000623931 403 ntBASIC17.75■□□□□ 0.43
GABRA4P48169 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABRA4P48169 RNF165-205ENST00000588679 2904 ntBASIC17.75■□□□□ 0.43
GABRA4P48169 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABRA4P48169 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.75■□□□□ 0.43
GABRA4P48169 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABRA4P48169 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.75■□□□□ 0.43
GABRA4P48169 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABRA4P48169 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABRA4P48169 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GABRA4P48169 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.75■□□□□ 0.43
GABRA4P48169 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.75■□□□□ 0.43
GABRA4P48169 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 AC005332.1-201ENST00000577698 1310 ntBASIC17.74■□□□□ 0.43
GABRA4P48169 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.74■□□□□ 0.43
GABRA4P48169 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GABRA4P48169 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GABRA4P48169 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.74■□□□□ 0.43
GABRA4P48169 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.74■□□□□ 0.43
GABRA4P48169 AC010240.3-201ENST00000607688 395 ntBASIC17.74■□□□□ 0.43
GABRA4P48169 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.74■□□□□ 0.43
GABRA4P48169 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABRA4P48169 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
GABRA4P48169 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
GABRA4P48169 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.73■□□□□ 0.43
GABRA4P48169 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GABRA4P48169 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.73■□□□□ 0.43
GABRA4P48169 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.73■□□□□ 0.43
GABRA4P48169 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.73■□□□□ 0.43
GABRA4P48169 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 PCED1CP-201ENST00000419887 785 ntBASIC17.73■□□□□ 0.43
GABRA4P48169 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 KRT18P41-201ENST00000518924 1277 ntBASIC17.73■□□□□ 0.43
GABRA4P48169 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.73■□□□□ 0.43
GABRA4P48169 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GABRA4P48169 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.73■□□□□ 0.43
GABRA4P48169 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.73■□□□□ 0.43
GABRA4P48169 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.73■□□□□ 0.43
GABRA4P48169 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.73■□□□□ 0.43
GABRA4P48169 AC091076.1-201ENST00000610741 619 ntBASIC17.73■□□□□ 0.43
GABRA4P48169 AC116407.4-201ENST00000623319 1061 ntBASIC17.73■□□□□ 0.43
GABRA4P48169 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GABRA4P48169 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.73■□□□□ 0.43
GABRA4P48169 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABRA4P48169 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.72■□□□□ 0.43
GABRA4P48169 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.72■□□□□ 0.43
GABRA4P48169 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.72■□□□□ 0.43
GABRA4P48169 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.72■□□□□ 0.43
GABRA4P48169 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
GABRA4P48169 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GABRA4P48169 AP000550.4-202ENST00000639755 178 ntBASIC17.72■□□□□ 0.43
GABRA4P48169 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms