Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC5P40937 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.65■□□□□ 0.9
RFC5P40937 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC5P40937 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.65■□□□□ 0.9
RFC5P40937 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.65■□□□□ 0.9
RFC5P40937 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC5P40937 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 AIRN-201ENST00000601203 4374 ntBASIC20.65■□□□□ 0.9
RFC5P40937 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
RFC5P40937 AL357033.4-201ENST00000617703 1807 ntBASIC20.64■□□□□ 0.9
RFC5P40937 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.64■□□□□ 0.9
RFC5P40937 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.64■□□□□ 0.9
RFC5P40937 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.64■□□□□ 0.9
RFC5P40937 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFC5P40937 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFC5P40937 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC5P40937 AC112907.2-201ENST00000448639 330 ntBASIC20.64■□□□□ 0.89
RFC5P40937 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.64■□□□□ 0.89
RFC5P40937 AL121956.5-201ENST00000625261 221 ntBASIC20.64■□□□□ 0.89
RFC5P40937 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC5P40937 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC5P40937 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RFC5P40937 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC5P40937 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC5P40937 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC5P40937 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.63■□□□□ 0.89
RFC5P40937 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.63■□□□□ 0.89
RFC5P40937 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RFC5P40937 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC5P40937 MIR3917-201ENST00000580971 93 ntBASIC20.63■□□□□ 0.89
RFC5P40937 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RFC5P40937 HYMAI.1-201ENST00000620949 238 ntBASIC20.63■□□□□ 0.89
RFC5P40937 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC5P40937 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC5P40937 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RFC5P40937 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.63■□□□□ 0.89
RFC5P40937 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
RFC5P40937 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC5P40937 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC5P40937 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RFC5P40937 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC5P40937 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.62■□□□□ 0.89
RFC5P40937 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC5P40937 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC5P40937 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC5P40937 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.62■□□□□ 0.89
RFC5P40937 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 MIR3180-4-201ENST00000582223 153 ntBASIC20.62■□□□□ 0.89
RFC5P40937 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
RFC5P40937 AC010240.3-201ENST00000607688 395 ntBASIC20.62■□□□□ 0.89
RFC5P40937 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC5P40937 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 AL020996.1-203ENST00000536896 2307 ntBASIC20.62■□□□□ 0.89
RFC5P40937 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms