Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC32.03■■■□□ 2.72
CFTRP13569 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC32.03■■■□□ 2.72
CFTRP13569 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC32.03■■■□□ 2.72
CFTRP13569 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC32.03■■■□□ 2.72
CFTRP13569 GZMM-202ENST00000592501 941 ntTSL 3 BASIC32.03■■■□□ 2.72
CFTRP13569 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC32.03■■■□□ 2.72
CFTRP13569 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC32.03■■■□□ 2.72
CFTRP13569 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC32.03■■■□□ 2.72
CFTRP13569 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC32.03■■■□□ 2.72
CFTRP13569 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 PMS2P2-201ENST00000425039 1128 ntBASIC32.03■■■□□ 2.72
CFTRP13569 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC32.03■■■□□ 2.72
CFTRP13569 AC140113.2-201ENST00000604370 208 ntBASIC32.03■■■□□ 2.72
CFTRP13569 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
CFTRP13569 AC068587.9-201ENST00000641814 219 ntBASIC32.03■■■□□ 2.72
CFTRP13569 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFTRP13569 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC32.02■■■□□ 2.72
CFTRP13569 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC32.02■■■□□ 2.72
CFTRP13569 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC32.02■■■□□ 2.72
CFTRP13569 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC32.02■■■□□ 2.72
CFTRP13569 FAM197Y3-203ENST00000618346 717 ntBASIC32.02■■■□□ 2.72
CFTRP13569 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC32.02■■■□□ 2.72
CFTRP13569 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFTRP13569 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CFTRP13569 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC32.01■■■□□ 2.72
CFTRP13569 PAN3-AS1-201ENST00000563843 1351 ntBASIC32.01■■■□□ 2.72
CFTRP13569 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
CFTRP13569 KRT8P50-201ENST00000562022 1438 ntBASIC32.01■■■□□ 2.72
CFTRP13569 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CFTRP13569 GPX1P2-201ENST00000429271 606 ntBASIC32.01■■■□□ 2.71
CFTRP13569 THAP5-204ENST00000438865 868 ntTSL 2 BASIC32.01■■■□□ 2.71
CFTRP13569 NMU-202ENST00000505262 693 ntTSL 3 BASIC32.01■■■□□ 2.71
CFTRP13569 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC32.01■■■□□ 2.71
CFTRP13569 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC32.01■■■□□ 2.71
CFTRP13569 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC32.01■■■□□ 2.71
CFTRP13569 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
CFTRP13569 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC32.01■■■□□ 2.71
CFTRP13569 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC32■■■□□ 2.71
CFTRP13569 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CFTRP13569 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
CFTRP13569 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC32■■■□□ 2.71
CFTRP13569 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
CFTRP13569 RCN1P2-201ENST00000398357 915 ntBASIC32■■■□□ 2.71
CFTRP13569 UPF3AP3-201ENST00000420996 769 ntBASIC32■■■□□ 2.71
CFTRP13569 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC32■■■□□ 2.71
CFTRP13569 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC32■■■□□ 2.71
CFTRP13569 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
CFTRP13569 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
CFTRP13569 USP39-204ENST00000409766 2033 ntTSL 2 BASIC32■■■□□ 2.71
CFTRP13569 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CFTRP13569 RPSAP43-201ENST00000402237 625 ntBASIC31.99■■■□□ 2.71
CFTRP13569 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC31.99■■■□□ 2.71
CFTRP13569 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC31.99■■■□□ 2.71
CFTRP13569 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC31.99■■■□□ 2.71
CFTRP13569 AP001160.2-201ENST00000596071 487 ntBASIC31.99■■■□□ 2.71
CFTRP13569 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CFTRP13569 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
CFTRP13569 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CFTRP13569 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CFTRP13569 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC31.98■■■□□ 2.71
CFTRP13569 AL357033.4-201ENST00000617703 1807 ntBASIC31.98■■■□□ 2.71
CFTRP13569 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
CFTRP13569 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CFTRP13569 LBX2-AS1-202ENST00000603175 2083 ntBASIC31.98■■■□□ 2.71
CFTRP13569 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
CFTRP13569 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CFTRP13569 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
CFTRP13569 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
CFTRP13569 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CFTRP13569 MED16-201ENST00000269814 1199 ntTSL 5 BASIC31.97■■■□□ 2.71
CFTRP13569 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CFTRP13569 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CFTRP13569 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CFTRP13569 AC098831.1-202ENST00000438821 336 ntBASIC31.97■■■□□ 2.71
CFTRP13569 AC113404.2-201ENST00000507884 177 ntBASIC31.97■■■□□ 2.71
CFTRP13569 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC31.97■■■□□ 2.71
CFTRP13569 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC31.97■■■□□ 2.71
CFTRP13569 ANKRD20A8P-203ENST00000641373 517 ntBASIC31.97■■■□□ 2.71
CFTRP13569 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC31.97■■■□□ 2.71
CFTRP13569 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CFTRP13569 PALM-208ENST00000592155 2272 ntTSL 4 BASIC31.97■■■□□ 2.71
CFTRP13569 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms