Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TPRP12270 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TPRP12270 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 FGFR3P6-201ENST00000457012 610 ntBASIC17.53■□□□□ 0.4
TPRP12270 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.53■□□□□ 0.4
TPRP12270 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.52■□□□□ 0.4
TPRP12270 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TPRP12270 TSEN15P1-201ENST00000423257 515 ntBASIC17.52■□□□□ 0.4
TPRP12270 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.52■□□□□ 0.4
TPRP12270 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.52■□□□□ 0.4
TPRP12270 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.52■□□□□ 0.4
TPRP12270 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.52■□□□□ 0.4
TPRP12270 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TPRP12270 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.52■□□□□ 0.4
TPRP12270 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPRP12270 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.52■□□□□ 0.4
TPRP12270 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPRP12270 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TPRP12270 AP002414.1-201ENST00000391405 1147 ntBASIC17.52■□□□□ 0.39
TPRP12270 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.52■□□□□ 0.39
TPRP12270 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.52■□□□□ 0.39
TPRP12270 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.52■□□□□ 0.39
TPRP12270 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPRP12270 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPRP12270 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPRP12270 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
TPRP12270 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
TPRP12270 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.51■□□□□ 0.39
TPRP12270 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 EP400NL-214ENST00000641289 2402 ntBASIC17.51■□□□□ 0.39
TPRP12270 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TPRP12270 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.51■□□□□ 0.39
TPRP12270 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.51■□□□□ 0.39
TPRP12270 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.51■□□□□ 0.39
TPRP12270 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.51■□□□□ 0.39
TPRP12270 MIR4745-201ENST00000577608 62 ntBASIC17.51■□□□□ 0.39
TPRP12270 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.51■□□□□ 0.39
TPRP12270 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.51■□□□□ 0.39
TPRP12270 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.51■□□□□ 0.39
TPRP12270 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.51■□□□□ 0.39
TPRP12270 AP005117.1-201ENST00000584346 1413 ntBASIC17.51■□□□□ 0.39
TPRP12270 AL162377.1-201ENST00000618844 1793 ntBASIC17.51■□□□□ 0.39
TPRP12270 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.51■□□□□ 0.39
TPRP12270 RN7SL606P-201ENST00000472779 293 ntBASIC17.51■□□□□ 0.39
TPRP12270 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 GUSBP12-201ENST00000513727 720 ntBASIC17.51■□□□□ 0.39
TPRP12270 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.51■□□□□ 0.39
TPRP12270 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TPRP12270 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPRP12270 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.51■□□□□ 0.39
TPRP12270 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TPRP12270 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPRP12270 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPRP12270 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPRP12270 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 AL139400.1-201ENST00000366220 510 ntBASIC17.5■□□□□ 0.39
TPRP12270 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TPRP12270 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.5■□□□□ 0.39
TPRP12270 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.5■□□□□ 0.39
TPRP12270 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
TPRP12270 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
TPRP12270 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPRP12270 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPRP12270 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPRP12270 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms