Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
UBCP0CG48 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.43■□□□□ 0.22
UBCP0CG48 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 RCC2P6-201ENST00000526625 1557 ntBASIC16.43■□□□□ 0.22
UBCP0CG48 AL162741.1-201ENST00000565563 1558 ntBASIC16.43■□□□□ 0.22
UBCP0CG48 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.43■□□□□ 0.22
UBCP0CG48 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.43■□□□□ 0.22
UBCP0CG48 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.43■□□□□ 0.22
UBCP0CG48 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.43■□□□□ 0.22
UBCP0CG48 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
UBCP0CG48 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
UBCP0CG48 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.43■□□□□ 0.22
UBCP0CG48 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBCP0CG48 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 AL133373.2-201ENST00000623187 2828 ntBASIC16.42■□□□□ 0.22
UBCP0CG48 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.42■□□□□ 0.22
UBCP0CG48 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
UBCP0CG48 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.42■□□□□ 0.22
UBCP0CG48 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBCP0CG48 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBCP0CG48 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.42■□□□□ 0.22
UBCP0CG48 Z85996.1-201ENST00000494644 937 ntBASIC16.42■□□□□ 0.22
UBCP0CG48 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.42■□□□□ 0.22
UBCP0CG48 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.42■□□□□ 0.22
UBCP0CG48 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.42■□□□□ 0.22
UBCP0CG48 MYC-208ENST00000641036 567 ntBASIC16.42■□□□□ 0.22
UBCP0CG48 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
UBCP0CG48 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBCP0CG48 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
UBCP0CG48 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
UBCP0CG48 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 NOC2LP2-201ENST00000407594 1944 ntBASIC16.41■□□□□ 0.22
UBCP0CG48 ABALON-201ENST00000629058 1903 ntBASIC16.41■□□□□ 0.22
UBCP0CG48 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
UBCP0CG48 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBCP0CG48 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 AL355802.2-201ENST00000402069 882 ntBASIC16.41■□□□□ 0.22
UBCP0CG48 AC239809.2-201ENST00000415381 517 ntBASIC16.41■□□□□ 0.22
UBCP0CG48 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.41■□□□□ 0.22
UBCP0CG48 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 KRT16P5-201ENST00000455284 522 ntBASIC16.41■□□□□ 0.22
UBCP0CG48 AC126763.1-201ENST00000552015 2118 ntBASIC16.41■□□□□ 0.22
UBCP0CG48 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.41■□□□□ 0.22
UBCP0CG48 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.41■□□□□ 0.22
UBCP0CG48 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
UBCP0CG48 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
UBCP0CG48 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
UBCP0CG48 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms