Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GPALPP1-207ENST00000611650 899 ntBASIC21.15■□□□□ 0.98
HOXC6P09630 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXC6P09630 Z82202.1-201ENST00000623446 1880 ntBASIC21.15■□□□□ 0.98
HOXC6P09630 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXC6P09630 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.14■□□□□ 0.98
HOXC6P09630 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOXC6P09630 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOXC6P09630 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.14■□□□□ 0.97
HOXC6P09630 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC6P09630 IGHGP-201ENST00000390555 1178 ntBASIC21.14■□□□□ 0.97
HOXC6P09630 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.14■□□□□ 0.97
HOXC6P09630 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXC6P09630 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXC6P09630 AC138894.3-201ENST00000603787 634 ntBASIC21.14■□□□□ 0.97
HOXC6P09630 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.14■□□□□ 0.97
HOXC6P09630 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC6P09630 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.14■□□□□ 0.97
HOXC6P09630 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.14■□□□□ 0.97
HOXC6P09630 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC6P09630 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXC6P09630 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC6P09630 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HOXC6P09630 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC6P09630 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXC6P09630 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC6P09630 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC6P09630 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC6P09630 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
HOXC6P09630 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC6P09630 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXC6P09630 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXC6P09630 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC6P09630 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.13■□□□□ 0.97
HOXC6P09630 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC6P09630 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXC6P09630 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXC6P09630 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC6P09630 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXC6P09630 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC6P09630 LINC00167-201ENST00000530583 1419 ntBASIC21.12■□□□□ 0.97
HOXC6P09630 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXC6P09630 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 AC034236.2-201ENST00000606662 1610 ntBASIC21.12■□□□□ 0.97
HOXC6P09630 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXC6P09630 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 MRPL3P1-201ENST00000400109 1033 ntBASIC21.12■□□□□ 0.97
HOXC6P09630 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
HOXC6P09630 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HOXC6P09630 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXC6P09630 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXC6P09630 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HOXC6P09630 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.12■□□□□ 0.97
HOXC6P09630 AC099336.1-202ENST00000602961 463 ntBASIC21.12■□□□□ 0.97
HOXC6P09630 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.12■□□□□ 0.97
HOXC6P09630 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HOXC6P09630 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXC6P09630 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.11■□□□□ 0.97
HOXC6P09630 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
HOXC6P09630 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.11■□□□□ 0.97
HOXC6P09630 AL592071.1-201ENST00000611956 408 ntBASIC21.11■□□□□ 0.97
HOXC6P09630 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.11■□□□□ 0.97
HOXC6P09630 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXC6P09630 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXC6P09630 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.1■□□□□ 0.97
HOXC6P09630 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HOXC6P09630 HLA-A-201ENST00000376802 1334 ntBASIC21.1■□□□□ 0.97
HOXC6P09630 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HOXC6P09630 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms