Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.9■□□□□ 0.62
SRPRAP08240 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SRPRAP08240 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.9■□□□□ 0.62
SRPRAP08240 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRPRAP08240 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRPRAP08240 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRPRAP08240 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRPRAP08240 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SRPRAP08240 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRPRAP08240 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRPRAP08240 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.9■□□□□ 0.62
SRPRAP08240 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRPRAP08240 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.9■□□□□ 0.62
SRPRAP08240 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRPRAP08240 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.89■□□□□ 0.62
SRPRAP08240 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
SRPRAP08240 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRPRAP08240 AL161938.1-201ENST00000569833 2180 ntBASIC18.89■□□□□ 0.62
SRPRAP08240 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SRPRAP08240 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SRPRAP08240 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SRPRAP08240 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SRPRAP08240 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SRPRAP08240 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SRPRAP08240 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.89■□□□□ 0.61
SRPRAP08240 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.89■□□□□ 0.61
SRPRAP08240 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.89■□□□□ 0.61
SRPRAP08240 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.89■□□□□ 0.61
SRPRAP08240 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.89■□□□□ 0.61
SRPRAP08240 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.89■□□□□ 0.61
SRPRAP08240 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.89■□□□□ 0.61
SRPRAP08240 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SRPRAP08240 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRPRAP08240 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.89■□□□□ 0.61
SRPRAP08240 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SRPRAP08240 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
SRPRAP08240 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.88■□□□□ 0.61
SRPRAP08240 HLA-F-220ENST00000434407 884 ntBASIC18.88■□□□□ 0.61
SRPRAP08240 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 AC079602.3-201ENST00000623931 403 ntBASIC18.88■□□□□ 0.61
SRPRAP08240 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.88■□□□□ 0.61
SRPRAP08240 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.88■□□□□ 0.61
SRPRAP08240 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SRPRAP08240 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRPRAP08240 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.88■□□□□ 0.61
SRPRAP08240 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.87■□□□□ 0.61
SRPRAP08240 AIRN-201ENST00000601203 4374 ntBASIC18.87■□□□□ 0.61
SRPRAP08240 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SRPRAP08240 AL645929.1-201ENST00000420084 975 ntBASIC18.87■□□□□ 0.61
SRPRAP08240 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.87■□□□□ 0.61
SRPRAP08240 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.87■□□□□ 0.61
SRPRAP08240 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.87■□□□□ 0.61
SRPRAP08240 AL136038.4-201ENST00000603606 1261 ntBASIC18.87■□□□□ 0.61
SRPRAP08240 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.87■□□□□ 0.61
SRPRAP08240 Z98044.1-201ENST00000632503 1764 ntBASIC18.87■□□□□ 0.61
SRPRAP08240 AC083906.6-201ENST00000641366 219 ntBASIC18.87■□□□□ 0.61
SRPRAP08240 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRPRAP08240 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SRPRAP08240 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SRPRAP08240 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.86■□□□□ 0.61
SRPRAP08240 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SRPRAP08240 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SRPRAP08240 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
SRPRAP08240 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.86■□□□□ 0.61
SRPRAP08240 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 AL357033.4-201ENST00000617703 1807 ntBASIC18.86■□□□□ 0.61
SRPRAP08240 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.86■□□□□ 0.61
SRPRAP08240 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.86■□□□□ 0.61
SRPRAP08240 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SRPRAP08240 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms