Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF253O75346 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF253O75346 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF253O75346 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
ZNF253O75346 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF253O75346 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF253O75346 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ZNF253O75346 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF253O75346 OR6D1P-203ENST00000641209 4860 ntBASIC14.58□□□□□ -0.08
ZNF253O75346 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF253O75346 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ZNF253O75346 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ZNF253O75346 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF253O75346 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF253O75346 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF253O75346 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF253O75346 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF253O75346 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF253O75346 TUBB8P6-201ENST00000436895 1288 ntBASIC14.57□□□□□ -0.08
ZNF253O75346 CDCA4P2-201ENST00000441182 718 ntBASIC14.57□□□□□ -0.08
ZNF253O75346 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
ZNF253O75346 AC091874.3-201ENST00000512672 1195 ntBASIC14.57□□□□□ -0.08
ZNF253O75346 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF253O75346 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF253O75346 AC006557.6-201ENST00000623071 864 ntBASIC14.57□□□□□ -0.08
ZNF253O75346 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF253O75346 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF253O75346 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF253O75346 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.57□□□□□ -0.08
ZNF253O75346 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF253O75346 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF253O75346 AC067852.2-201ENST00000590513 2313 ntBASIC14.57□□□□□ -0.08
ZNF253O75346 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF253O75346 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF253O75346 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ZNF253O75346 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF253O75346 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF253O75346 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.56□□□□□ -0.08
ZNF253O75346 AL121832.2-201ENST00000610979 668 ntBASIC14.56□□□□□ -0.08
ZNF253O75346 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 AL121829.2-201ENST00000620908 328 ntBASIC14.56□□□□□ -0.08
ZNF253O75346 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF253O75346 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 TNRC18P3-201ENST00000441896 2691 ntBASIC14.56□□□□□ -0.08
ZNF253O75346 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF253O75346 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF253O75346 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ZNF253O75346 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF253O75346 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ZNF253O75346 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms