Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTNSO60931 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNSO60931 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.54■□□□□ 0.4
CTNSO60931 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CTNSO60931 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTNSO60931 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CTNSO60931 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CTNSO60931 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNSO60931 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNSO60931 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTNSO60931 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNSO60931 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNSO60931 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNSO60931 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTNSO60931 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNSO60931 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNSO60931 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNSO60931 BX664615.1-201ENST00000443558 458 ntBASIC17.53■□□□□ 0.4
CTNSO60931 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNSO60931 NEK4P2-201ENST00000580004 1012 ntBASIC17.53■□□□□ 0.4
CTNSO60931 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTNSO60931 AC092865.7-201ENST00000641832 219 ntBASIC17.53■□□□□ 0.4
CTNSO60931 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.53■□□□□ 0.4
CTNSO60931 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CTNSO60931 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 CROCCP3-202ENST00000420820 1947 ntBASIC17.53■□□□□ 0.4
CTNSO60931 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNSO60931 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNSO60931 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.52■□□□□ 0.4
CTNSO60931 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
CTNSO60931 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNSO60931 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTNSO60931 AC034236.2-201ENST00000606662 1610 ntBASIC17.52■□□□□ 0.4
CTNSO60931 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 AP000523.1-201ENST00000398242 1049 ntBASIC17.52■□□□□ 0.4
CTNSO60931 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
CTNSO60931 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNSO60931 AC009947.2-201ENST00000444014 672 ntBASIC17.52■□□□□ 0.4
CTNSO60931 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.52■□□□□ 0.4
CTNSO60931 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.52■□□□□ 0.4
CTNSO60931 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNSO60931 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 Z98044.1-201ENST00000632503 1764 ntBASIC17.52■□□□□ 0.4
CTNSO60931 KRT8P7-201ENST00000533003 1432 ntBASIC17.52■□□□□ 0.4
CTNSO60931 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNSO60931 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNSO60931 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.52■□□□□ 0.39
CTNSO60931 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTNSO60931 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNSO60931 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNSO60931 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 RCN1P1-201ENST00000400413 996 ntBASIC17.51■□□□□ 0.39
CTNSO60931 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.51■□□□□ 0.39
CTNSO60931 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNSO60931 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms