Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MYC-208ENST00000641036 567 ntBASIC18.45■□□□□ 0.54
TRIM13O60858 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM13O60858 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM13O60858 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM13O60858 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM13O60858 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM13O60858 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM13O60858 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM13O60858 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM13O60858 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM13O60858 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM13O60858 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM13O60858 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM13O60858 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM13O60858 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM13O60858 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM13O60858 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM13O60858 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM13O60858 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM13O60858 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM13O60858 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM13O60858 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM13O60858 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM13O60858 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 AP000997.3-201ENST00000623333 2250 ntBASIC18.44■□□□□ 0.54
TRIM13O60858 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM13O60858 KRT8P32-201ENST00000512863 1461 ntBASIC18.44■□□□□ 0.54
TRIM13O60858 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM13O60858 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM13O60858 HTR7P1-202ENST00000624664 4411 ntBASIC18.43■□□□□ 0.54
TRIM13O60858 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM13O60858 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM13O60858 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM13O60858 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TRIM13O60858 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM13O60858 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM13O60858 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM13O60858 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.43■□□□□ 0.54
TRIM13O60858 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 Z85996.1-201ENST00000494644 937 ntBASIC18.43■□□□□ 0.54
TRIM13O60858 UNC93B5-201ENST00000530315 699 ntBASIC18.43■□□□□ 0.54
TRIM13O60858 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.43■□□□□ 0.54
TRIM13O60858 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.43■□□□□ 0.54
TRIM13O60858 AL109923.1-201ENST00000618799 583 ntBASIC18.43■□□□□ 0.54
TRIM13O60858 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM13O60858 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM13O60858 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 AC008764.6-201ENST00000595909 2069 ntBASIC18.43■□□□□ 0.54
TRIM13O60858 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM13O60858 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM13O60858 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM13O60858 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRIM13O60858 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM13O60858 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM13O60858 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM13O60858 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM13O60858 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms