Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
URB1O60287 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.66■□□□□ 0.42
URB1O60287 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.66■□□□□ 0.42
URB1O60287 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.66■□□□□ 0.42
URB1O60287 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.65■□□□□ 0.42
URB1O60287 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.65■□□□□ 0.42
URB1O60287 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.65■□□□□ 0.42
URB1O60287 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
URB1O60287 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.65■□□□□ 0.42
URB1O60287 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
URB1O60287 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.65■□□□□ 0.42
URB1O60287 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 AC009065.1-201ENST00000564055 1225 ntBASIC17.65■□□□□ 0.42
URB1O60287 AC148477.8-201ENST00000624298 468 ntBASIC17.65■□□□□ 0.42
URB1O60287 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
URB1O60287 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
URB1O60287 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
URB1O60287 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
URB1O60287 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
URB1O60287 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
URB1O60287 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
URB1O60287 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
URB1O60287 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
URB1O60287 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.64■□□□□ 0.41
URB1O60287 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.64■□□□□ 0.41
URB1O60287 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.64■□□□□ 0.41
URB1O60287 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 AF186996.4-201ENST00000467186 377 ntBASIC17.64■□□□□ 0.41
URB1O60287 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.64■□□□□ 0.41
URB1O60287 AC090616.6-201ENST00000582640 721 ntBASIC17.64■□□□□ 0.41
URB1O60287 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.64■□□□□ 0.41
URB1O60287 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
URB1O60287 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.64■□□□□ 0.41
URB1O60287 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.64■□□□□ 0.41
URB1O60287 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
URB1O60287 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.64■□□□□ 0.41
URB1O60287 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
URB1O60287 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 AC106730.1-201ENST00000566722 1090 ntBASIC17.64■□□□□ 0.41
URB1O60287 MIR3917-201ENST00000580971 93 ntBASIC17.64■□□□□ 0.41
URB1O60287 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.64■□□□□ 0.41
URB1O60287 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.64■□□□□ 0.41
URB1O60287 AC027601.4-201ENST00000611259 610 ntBASIC17.64■□□□□ 0.41
URB1O60287 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
URB1O60287 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
URB1O60287 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
URB1O60287 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
URB1O60287 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
URB1O60287 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
URB1O60287 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.63■□□□□ 0.41
URB1O60287 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.63■□□□□ 0.41
URB1O60287 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.63■□□□□ 0.41
URB1O60287 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.63■□□□□ 0.41
URB1O60287 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.63■□□□□ 0.41
URB1O60287 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms