Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX4O60224 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.97■□□□□ 0.31
SSX4O60224 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
SSX4O60224 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX4O60224 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX4O60224 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX4O60224 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX4O60224 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX4O60224 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX4O60224 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX4O60224 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX4O60224 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.97■□□□□ 0.31
SSX4O60224 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SSX4O60224 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SSX4O60224 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
SSX4O60224 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.96■□□□□ 0.31
SSX4O60224 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SSX4O60224 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SSX4O60224 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX4O60224 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.96■□□□□ 0.31
SSX4O60224 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.96■□□□□ 0.31
SSX4O60224 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX4O60224 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX4O60224 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.96■□□□□ 0.31
SSX4O60224 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.96■□□□□ 0.31
SSX4O60224 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 AC133561.5-201ENST00000635547 218 ntBASIC16.96■□□□□ 0.31
SSX4O60224 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SSX4O60224 FP475955.4-201ENST00000623131 1990 ntBASIC16.96■□□□□ 0.31
SSX4O60224 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX4O60224 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSX4O60224 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SSX4O60224 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
SSX4O60224 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSX4O60224 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.96■□□□□ 0.3
SSX4O60224 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSX4O60224 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSX4O60224 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.95■□□□□ 0.3
SSX4O60224 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSX4O60224 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SSX4O60224 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SSX4O60224 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
SSX4O60224 AC009237.14-201ENST00000609975 1594 ntBASIC16.95■□□□□ 0.3
SSX4O60224 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SSX4O60224 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SSX4O60224 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.95■□□□□ 0.3
SSX4O60224 TSPY15P-201ENST00000457163 923 ntBASIC16.95■□□□□ 0.3
SSX4O60224 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX4O60224 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SSX4O60224 AC023632.3-201ENST00000521633 145 ntBASIC16.95■□□□□ 0.3
SSX4O60224 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX4O60224 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX4O60224 AL121829.2-201ENST00000620908 328 ntBASIC16.95■□□□□ 0.3
SSX4O60224 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX4O60224 AC124283.5-201ENST00000624661 1809 ntBASIC16.95■□□□□ 0.3
SSX4O60224 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX4O60224 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SSX4O60224 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.95■□□□□ 0.3
SSX4O60224 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX4O60224 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 KRT8P36-201ENST00000489121 1440 ntBASIC16.95■□□□□ 0.3
SSX4O60224 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX4O60224 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX4O60224 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX4O60224 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SSX4O60224 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
SSX4O60224 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SSX4O60224 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX4O60224 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX4O60224 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms