Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 NEK4P2-201ENST00000580004 1012 ntBASIC20.29■□□□□ 0.84
EXTL3O43909 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
EXTL3O43909 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EXTL3O43909 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.29■□□□□ 0.84
EXTL3O43909 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
EXTL3O43909 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXTL3O43909 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.28■□□□□ 0.84
EXTL3O43909 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EXTL3O43909 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
EXTL3O43909 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.28■□□□□ 0.84
EXTL3O43909 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.28■□□□□ 0.84
EXTL3O43909 KRT18P57-201ENST00000443599 1254 ntBASIC20.28■□□□□ 0.84
EXTL3O43909 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EXTL3O43909 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.28■□□□□ 0.84
EXTL3O43909 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.28■□□□□ 0.84
EXTL3O43909 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.28■□□□□ 0.84
EXTL3O43909 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EXTL3O43909 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EXTL3O43909 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXTL3O43909 KRT8P7-201ENST00000533003 1432 ntBASIC20.27■□□□□ 0.84
EXTL3O43909 HOXB1-202ENST00000577092 1414 ntBASIC20.27■□□□□ 0.84
EXTL3O43909 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
EXTL3O43909 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.27■□□□□ 0.84
EXTL3O43909 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
EXTL3O43909 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
EXTL3O43909 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.27■□□□□ 0.84
EXTL3O43909 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.27■□□□□ 0.84
EXTL3O43909 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.27■□□□□ 0.84
EXTL3O43909 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.27■□□□□ 0.84
EXTL3O43909 BX664615.1-201ENST00000443558 458 ntBASIC20.27■□□□□ 0.84
EXTL3O43909 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
EXTL3O43909 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.27■□□□□ 0.84
EXTL3O43909 AL590326.2-201ENST00000625139 305 ntBASIC20.27■□□□□ 0.84
EXTL3O43909 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXTL3O43909 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EXTL3O43909 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
EXTL3O43909 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.27■□□□□ 0.83
EXTL3O43909 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
EXTL3O43909 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EXTL3O43909 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 AP000523.1-201ENST00000398242 1049 ntBASIC20.26■□□□□ 0.83
EXTL3O43909 KRT18P23-201ENST00000435622 1283 ntBASIC20.26■□□□□ 0.83
EXTL3O43909 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.26■□□□□ 0.83
EXTL3O43909 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.26■□□□□ 0.83
EXTL3O43909 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.26■□□□□ 0.83
EXTL3O43909 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.26■□□□□ 0.83
EXTL3O43909 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.26■□□□□ 0.83
EXTL3O43909 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.26■□□□□ 0.83
EXTL3O43909 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms