Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 KIRREL3-AS3-201ENST00000404882 831 ntBASIC31.99■■■□□ 2.71
CUX2O14529 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC31.99■■■□□ 2.71
CUX2O14529 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
CUX2O14529 MIR4469-201ENST00000583919 79 ntBASIC31.99■■■□□ 2.71
CUX2O14529 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CUX2O14529 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
CUX2O14529 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CUX2O14529 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CUX2O14529 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC31.98■■■□□ 2.71
CUX2O14529 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC31.98■■■□□ 2.71
CUX2O14529 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC31.98■■■□□ 2.71
CUX2O14529 AC011840.4-201ENST00000578471 627 ntBASIC31.98■■■□□ 2.71
CUX2O14529 AC010240.3-201ENST00000607688 395 ntBASIC31.98■■■□□ 2.71
CUX2O14529 AC008735.5-201ENST00000623544 497 ntBASIC31.98■■■□□ 2.71
CUX2O14529 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CUX2O14529 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CUX2O14529 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CUX2O14529 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CUX2O14529 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
CUX2O14529 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CUX2O14529 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
CUX2O14529 UNC93B6-202ENST00000528242 690 ntBASIC31.97■■■□□ 2.71
CUX2O14529 PNMT-203ENST00000581428 677 ntTSL 2 BASIC31.97■■■□□ 2.71
CUX2O14529 AC027612.4-201ENST00000605371 583 ntBASIC31.97■■■□□ 2.71
CUX2O14529 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CUX2O14529 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CUX2O14529 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC31.97■■■□□ 2.71
CUX2O14529 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CUX2O14529 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
CUX2O14529 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC31.97■■■□□ 2.71
CUX2O14529 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
CUX2O14529 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC31.97■■■□□ 2.71
CUX2O14529 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC31.97■■■□□ 2.71
CUX2O14529 AC005336.2-201ENST00000593183 939 ntBASIC31.97■■■□□ 2.71
CUX2O14529 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC31.97■■■□□ 2.71
CUX2O14529 AC012645.4-201ENST00000610691 1061 ntBASIC31.97■■■□□ 2.71
CUX2O14529 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC31.97■■■□□ 2.71
CUX2O14529 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
CUX2O14529 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
CUX2O14529 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CUX2O14529 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CUX2O14529 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC31.96■■■□□ 2.71
CUX2O14529 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
CUX2O14529 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC31.96■■■□□ 2.71
CUX2O14529 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC31.96■■■□□ 2.71
CUX2O14529 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC31.96■■■□□ 2.71
CUX2O14529 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC31.96■■■□□ 2.71
CUX2O14529 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CUX2O14529 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
CUX2O14529 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
CUX2O14529 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CUX2O14529 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CUX2O14529 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CUX2O14529 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC31.95■■■□□ 2.7
CUX2O14529 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC31.95■■■□□ 2.7
CUX2O14529 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC31.95■■■□□ 2.7
CUX2O14529 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC31.95■■■□□ 2.7
CUX2O14529 OR7E14P-202ENST00000530490 1290 ntBASIC31.95■■■□□ 2.7
CUX2O14529 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC31.95■■■□□ 2.7
CUX2O14529 GZMM-202ENST00000592501 941 ntTSL 3 BASIC31.95■■■□□ 2.7
CUX2O14529 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
CUX2O14529 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC31.95■■■□□ 2.7
CUX2O14529 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC31.94■■■□□ 2.7
CUX2O14529 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC31.94■■■□□ 2.7
CUX2O14529 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC31.94■■■□□ 2.7
CUX2O14529 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC31.94■■■□□ 2.7
CUX2O14529 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
CUX2O14529 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CUX2O14529 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC31.94■■■□□ 2.7
CUX2O14529 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC31.94■■■□□ 2.7
CUX2O14529 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CUX2O14529 LINC00565-201ENST00000562710 2331 ntBASIC31.94■■■□□ 2.7
CUX2O14529 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC31.94■■■□□ 2.7
CUX2O14529 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CUX2O14529 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CUX2O14529 PRSS29P-201ENST00000440800 595 ntBASIC31.93■■■□□ 2.7
CUX2O14529 PPOX-214ENST00000535223 664 ntTSL 3 BASIC31.93■■■□□ 2.7
CUX2O14529 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC31.93■■■□□ 2.7
CUX2O14529 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC31.93■■■□□ 2.7
CUX2O14529 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CUX2O14529 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CUX2O14529 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CUX2O14529 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CUX2O14529 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CUX2O14529 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC31.93■■■□□ 2.7
CUX2O14529 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms