Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 AC005829.1-201ENST00000570002 483 ntBASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 SDHAP1-207ENST00000440850 2000 ntBASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 AC133561.1-201ENST00000568600 2415 ntBASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 AP005117.1-201ENST00000584346 1413 ntBASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM88BA6NKF7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 AC254562.1-201ENST00000417586 456 ntBASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TMEM88BA6NKF7 EP400NL-214ENST00000641289 2402 ntBASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 AC105339.3-201ENST00000560043 636 ntBASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM88BA6NKF7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 HLA-J-202ENST00000469281 1241 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms