Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 AL023284.2-201ENST00000405850 579 ntBASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 NEK4P2-201ENST00000580004 1012 ntBASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 AC008622.2-201ENST00000617006 1229 ntBASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 AC083906.6-201ENST00000641366 219 ntBASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM9A6NGZ8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 RCC2P3-201ENST00000418112 1537 ntBASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 AC068587.9-201ENST00000641814 219 ntBASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM9A6NGZ8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 GPAT2P1-201ENST00000444924 1672 ntBASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 MYC-208ENST00000641036 567 ntBASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 AC092865.7-201ENST00000641832 219 ntBASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM9A6NGZ8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 HEIH-201ENST00000623091 1652 ntBASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM9A6NGZ8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms