Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CNOT1A5YKK6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 AC008735.5-201ENST00000623544 497 ntBASIC17.85■□□□□ 0.45
CNOT1A5YKK6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.85■□□□□ 0.45
CNOT1A5YKK6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.84■□□□□ 0.45
CNOT1A5YKK6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 HLA-J-202ENST00000469281 1241 ntBASIC17.84■□□□□ 0.45
CNOT1A5YKK6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 KRT89P-201ENST00000620027 1478 ntBASIC17.84■□□□□ 0.45
CNOT1A5YKK6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 AC099343.3-201ENST00000605834 2503 ntBASIC17.84■□□□□ 0.45
CNOT1A5YKK6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 AC012640.2-201ENST00000561606 901 ntBASIC17.84■□□□□ 0.45
CNOT1A5YKK6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT1A5YKK6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.83■□□□□ 0.45
CNOT1A5YKK6 AC009237.14-201ENST00000609975 1594 ntBASIC17.83■□□□□ 0.45
CNOT1A5YKK6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT1A5YKK6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 CNN2P11-201ENST00000429351 262 ntBASIC17.82■□□□□ 0.44
CNOT1A5YKK6 AC112482.1-201ENST00000492080 688 ntBASIC17.82■□□□□ 0.44
CNOT1A5YKK6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 MTDHP3-201ENST00000594186 672 ntBASIC17.82■□□□□ 0.44
CNOT1A5YKK6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 AL109659.2-201ENST00000606809 1674 ntBASIC17.82■□□□□ 0.44
CNOT1A5YKK6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms