Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN10AQ9Y5Y9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 TP73-AS1-207ENST00000624167 988 ntBASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN10AQ9Y5Y9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 RNA5SP419-201ENST00000515908 135 ntBASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 AC120114.3-201ENST00000611923 658 ntBASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCN10AQ9Y5Y9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 HLA-A-201ENST00000376802 1334 ntBASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 SAPCD2P3-201ENST00000455031 850 ntBASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 AL353801.3-201ENST00000609898 542 ntBASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN10AQ9Y5Y9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 RN7SL606P-201ENST00000472779 293 ntBASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 VENTXP7-201ENST00000475503 772 ntBASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 AL662844.1-201ENST00000546340 181 ntBASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 AC124864.1-201ENST00000623408 392 ntBASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 AP000593.1-201ENST00000393668 712 ntBASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 AC009065.1-201ENST00000564055 1225 ntBASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SCN10AQ9Y5Y9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms