Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 AC074051.2-201ENST00000565115 352 ntBASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 AC233702.3-201ENST00000578656 1387 ntBASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 AL160237.2-201ENST00000556165 472 ntBASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 AP005901.3-202ENST00000581653 237 ntBASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 IGHV3-41-201ENST00000613121 348 ntBASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHAC2Q9Y5I4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 MRPL3P1-201ENST00000400109 1033 ntBASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 KRT16P4-201ENST00000453883 522 ntBASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 KRT8P7-201ENST00000533003 1432 ntBASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 SLC25A6P4-201ENST00000586535 553 ntBASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 AL121772.3-201ENST00000610840 674 ntBASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHAC2Q9Y5I4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHAC2Q9Y5I4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
PCDHAC2Q9Y5I4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHAC2Q9Y5I4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHAC2Q9Y5I4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 AKR1C7P-201ENST00000305623 895 ntBASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 AC104819.1-201ENST00000504587 486 ntBASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 AP002469.2-201ENST00000531724 424 ntBASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 AC099336.1-202ENST00000602961 463 ntBASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHAC2Q9Y5I4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms