Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 AC009113.1-201ENST00000570267 2443 ntBASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 MFAP1P1-201ENST00000442257 1255 ntBASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 LINC01238-205ENST00000567549 1107 ntBASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB3Q9Y5E6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 NTF6B-201ENST00000591913 560 ntBASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 AC104581.1-202ENST00000635932 2618 ntBASIC18.34■□□□□ 0.53
PCDHB3Q9Y5E6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB3Q9Y5E6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 AC104076.2-201ENST00000448912 469 ntBASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 ECEL1P2-202ENST00000465689 757 ntBASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB3Q9Y5E6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms