Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 AC005082.1-201ENST00000413042 2259 ntBASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGC3Q9UN70 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 AC087499.1-201ENST00000418141 1075 ntBASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 FAM87A-204ENST00000613235 858 ntBASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 AC126763.1-201ENST00000552015 2118 ntBASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGC3Q9UN70 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 AP000593.1-201ENST00000393668 712 ntBASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 AC090164.3-201ENST00000610780 2143 ntBASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGC3Q9UN70 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 LINC01568-207ENST00000641790 1380 ntBASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGC3Q9UN70 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms