Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA9Q9UGM1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 AL355075.4-201ENST00000554988 638 ntBASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 KRT8P3-201ENST00000519669 1449 ntBASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA9Q9UGM1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 AP000525.1-201ENST00000608286 694 ntBASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 AC005082.1-201ENST00000413042 2259 ntBASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA9Q9UGM1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 AL596275.1-201ENST00000423464 877 ntBASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 AC079598.2-202ENST00000546624 1451 ntBASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 ANO7L1-203ENST00000602586 1720 ntBASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA9Q9UGM1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms