Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCF1Q9UBD9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCF1Q9UBD9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 AP000550.4-202ENST00000639755 178 ntBASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCF1Q9UBD9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 RNF165-205ENST00000588679 2904 ntBASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 PCED1CP-201ENST00000419887 785 ntBASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 KRT8P7-201ENST00000533003 1432 ntBASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 AC068587.9-201ENST00000641814 219 ntBASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCF1Q9UBD9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 LINC01311-201ENST00000565162 1445 ntBASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 HOXB1-202ENST00000577092 1414 ntBASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 MIR564-202ENST00000385049 94 ntBASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 ZNF444P1-201ENST00000559497 298 ntBASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 AL136038.3-201ENST00000561909 1096 ntBASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 AC005332.1-201ENST00000577698 1310 ntBASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCF1Q9UBD9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms