Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 AC124864.1-201ENST00000623408 392 ntBASIC19.87■□□□□ 0.77
CHD7Q9P2D1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 MINOS1P3-201ENST00000457048 203 ntBASIC19.86■□□□□ 0.77
CHD7Q9P2D1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.86■□□□□ 0.77
CHD7Q9P2D1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD7Q9P2D1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 VENTXP7-201ENST00000475503 772 ntBASIC19.85■□□□□ 0.77
CHD7Q9P2D1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD7Q9P2D1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 AC012676.1-201ENST00000574705 1949 ntBASIC19.84■□□□□ 0.77
CHD7Q9P2D1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 FAM215A-202ENST00000632077 792 ntBASIC19.84■□□□□ 0.77
CHD7Q9P2D1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 AL512353.2-201ENST00000448759 1962 ntBASIC19.84■□□□□ 0.77
CHD7Q9P2D1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD7Q9P2D1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 AC104390.1-201ENST00000555663 520 ntBASIC19.83■□□□□ 0.77
CHD7Q9P2D1 AC145285.3-201ENST00000564603 959 ntBASIC19.83■□□□□ 0.77
CHD7Q9P2D1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms