Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC01568-207ENST00000641790 1380 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 KRT8P32-201ENST00000512863 1461 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 RCC2P3-201ENST00000418112 1537 ntBASIC18.13■□□□□ 0.49
CUEDC1Q9NWM3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 ECEL1P2-202ENST00000465689 757 ntBASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 AL353719.1-201ENST00000566847 864 ntBASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 AC083906.6-201ENST00000641366 219 ntBASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
CUEDC1Q9NWM3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 AL023284.2-201ENST00000405850 579 ntBASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 TSPY17P-201ENST00000450329 467 ntBASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CUEDC1Q9NWM3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 CROCCP3-202ENST00000420820 1947 ntBASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 HEIH-201ENST00000623091 1652 ntBASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 KRT18P22-201ENST00000402024 1347 ntBASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 AL137013.1-201ENST00000432946 1228 ntBASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 FAM87A-204ENST00000613235 858 ntBASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 AC068587.9-201ENST00000641814 219 ntBASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 AC093503.3-201ENST00000624917 2352 ntBASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.1■□□□□ 0.49
CUEDC1Q9NWM3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CUEDC1Q9NWM3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms