Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 CCR12P-201ENST00000446203 998 ntBASIC17.64■□□□□ 0.41
KLHL1Q9NR64 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 FAM87A-204ENST00000613235 858 ntBASIC17.64■□□□□ 0.41
KLHL1Q9NR64 AC116562.4-202ENST00000641738 218 ntBASIC17.64■□□□□ 0.41
KLHL1Q9NR64 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 Z82202.1-201ENST00000623446 1880 ntBASIC17.64■□□□□ 0.41
KLHL1Q9NR64 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 AC096733.2-201ENST00000609937 1394 ntBASIC17.64■□□□□ 0.41
KLHL1Q9NR64 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KLHL1Q9NR64 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 AL032819.2-201ENST00000624543 2162 ntBASIC17.63■□□□□ 0.41
KLHL1Q9NR64 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 AC104076.2-201ENST00000448912 469 ntBASIC17.63■□□□□ 0.41
KLHL1Q9NR64 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL1Q9NR64 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.62■□□□□ 0.41
KLHL1Q9NR64 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms