Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 FAAHP1-202ENST00000446499 1238 ntBASIC19.36■□□□□ 0.69
BRD9Q9H8M2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 SLC25A24-204ENST00000569674 2357 ntBASIC19.36■□□□□ 0.69
BRD9Q9H8M2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD9Q9H8M2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 KRT8P3-201ENST00000519669 1449 ntBASIC19.35■□□□□ 0.69
BRD9Q9H8M2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 KRT18P1-202ENST00000452408 1331 ntBASIC19.35■□□□□ 0.69
BRD9Q9H8M2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 HLA-F-220ENST00000434407 884 ntBASIC19.35■□□□□ 0.69
BRD9Q9H8M2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 MIR3917-201ENST00000580971 93 ntBASIC19.35■□□□□ 0.69
BRD9Q9H8M2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.35■□□□□ 0.69
BRD9Q9H8M2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 TSPY22P-201ENST00000427496 604 ntBASIC19.34■□□□□ 0.69
BRD9Q9H8M2 NUS1P1-201ENST00000446295 882 ntBASIC19.34■□□□□ 0.69
BRD9Q9H8M2 FDX1P1-201ENST00000449115 551 ntBASIC19.34■□□□□ 0.69
BRD9Q9H8M2 UNC93B7-201ENST00000509439 705 ntBASIC19.34■□□□□ 0.69
BRD9Q9H8M2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 AL391807.1-203ENST00000604392 2365 ntBASIC19.34■□□□□ 0.69
BRD9Q9H8M2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD9Q9H8M2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRD9Q9H8M2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
BRD9Q9H8M2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BRD9Q9H8M2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.33■□□□□ 0.69
BRD9Q9H8M2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BRD9Q9H8M2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
BRD9Q9H8M2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRD9Q9H8M2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRD9Q9H8M2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.32■□□□□ 0.68
BRD9Q9H8M2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
BRD9Q9H8M2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRD9Q9H8M2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms