Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CHMP4BQ9H444 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 AL357033.4-201ENST00000617703 1807 ntBASIC23.64■■□□□ 1.38
CHMP4BQ9H444 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.64■■□□□ 1.38
CHMP4BQ9H444 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 KRT8P45-201ENST00000414328 1447 ntBASIC23.64■■□□□ 1.37
CHMP4BQ9H444 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHMP4BQ9H444 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 SLC25A1P2-201ENST00000430693 912 ntBASIC23.63■■□□□ 1.37
CHMP4BQ9H444 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 KRT18P41-201ENST00000518924 1277 ntBASIC23.63■■□□□ 1.37
CHMP4BQ9H444 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC23.63■■□□□ 1.37
CHMP4BQ9H444 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 MCCD1P1-208ENST00000445732 328 ntBASIC23.62■■□□□ 1.37
CHMP4BQ9H444 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 AC079598.2-202ENST00000546624 1451 ntBASIC23.62■■□□□ 1.37
CHMP4BQ9H444 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CHMP4BQ9H444 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 RBM17P1-201ENST00000453646 1190 ntBASIC23.61■■□□□ 1.37
CHMP4BQ9H444 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 AC138932.1-201ENST00000534164 6830 ntBASIC23.61■■□□□ 1.37
CHMP4BQ9H444 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms