Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 SEC1P-202ENST00000473944 940 ntBASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 AC073648.2-201ENST00000510116 352 ntBASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 AC036111.1-201ENST00000533973 1582 ntBASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
UBE2OQ9C0C9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 AL162377.1-201ENST00000618844 1793 ntBASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 AL512408.1-201ENST00000569378 2000 ntBASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2OQ9C0C9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 AF186996.4-201ENST00000467186 377 ntBASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 AC140113.2-201ENST00000604370 208 ntBASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2OQ9C0C9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 NUS1P2-201ENST00000417358 873 ntBASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 KRT18P67-201ENST00000432816 1264 ntBASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 RPL13AP23-201ENST00000480739 586 ntBASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
UBE2OQ9C0C9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 GPAT2P1-201ENST00000444924 1672 ntBASIC20.59■□□□□ 0.89
UBE2OQ9C0C9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms