Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC124067.4-201ENST00000519691 2379 ntBASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 NTF6G-201ENST00000591094 616 ntBASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 AC134043.2-201ENST00000624206 2238 ntBASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 AC084018.2-201ENST00000613093 2607 ntBASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 AC073592.3-201ENST00000625118 1834 ntBASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 MIR638-201ENST00000385237 100 ntBASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 AC069236.1-201ENST00000604339 616 ntBASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP4Q9BWG4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 DUX4L16-201ENST00000555130 1264 ntBASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 FER1L4-210ENST00000615531 5998 ntBASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms