Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCM2Q9BSQ5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 AL137013.1-201ENST00000432946 1228 ntBASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 AC008556.1-201ENST00000610908 2040 ntBASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.44■□□□□ 0.54
CCM2Q9BSQ5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 MIR3180-5-201ENST00000583743 153 ntBASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 TNXA-203ENST00000507684 2038 ntBASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.43■□□□□ 0.54
CCM2Q9BSQ5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 KRT8P45-201ENST00000414328 1447 ntBASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 ATP5G1P1-201ENST00000448724 379 ntBASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 CR769767.2-201ENST00000622735 460 ntBASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 MTMR9LP-203ENST00000426597 1545 ntBASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2Q9BSQ5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms