Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 FZD10-202ENST00000539839 3282 ntBASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 AC005521.1-201ENST00000393351 872 ntBASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 MIR1224-201ENST00000408193 85 ntBASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 CCR12P-201ENST00000446203 998 ntBASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 ATP5G1P1-201ENST00000448724 379 ntBASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 RN7SL850P-201ENST00000579959 291 ntBASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 AC104417.2-201ENST00000562989 1793 ntBASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 BCL2-203ENST00000589955 5011 ntBASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 AL032819.2-201ENST00000624543 2162 ntBASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 TSPY14P-201ENST00000303979 915 ntBASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 AC113347.1-201ENST00000413321 391 ntBASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 KRT18P57-201ENST00000443599 1254 ntBASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 SLC25A3P1-201ENST00000443844 931 ntBASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 AC116562.4-202ENST00000641738 218 ntBASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.71■□□□□ 0.11
PCGF1Q9BSM1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.1
PCGF1Q9BSM1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCGF1Q9BSM1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCGF1Q9BSM1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.7■□□□□ 0.1
PCGF1Q9BSM1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCGF1Q9BSM1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms