Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDNQ99608 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDNQ99608 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NDNQ99608 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NDNQ99608 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.79■□□□□ 0.6
NDNQ99608 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 AC138932.1-201ENST00000534164 6830 ntBASIC18.79■□□□□ 0.6
NDNQ99608 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.79■□□□□ 0.6
NDNQ99608 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 AC091390.4-202ENST00000476426 537 ntBASIC18.79■□□□□ 0.6
NDNQ99608 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDNQ99608 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.79■□□□□ 0.6
NDNQ99608 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.79■□□□□ 0.6
NDNQ99608 AC018470.1-201ENST00000624790 3129 ntBASIC18.78■□□□□ 0.6
NDNQ99608 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.78■□□□□ 0.6
NDNQ99608 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
NDNQ99608 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.78■□□□□ 0.6
NDNQ99608 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NDNQ99608 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.78■□□□□ 0.6
NDNQ99608 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.78■□□□□ 0.6
NDNQ99608 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 PRORSD1P-201ENST00000295112 541 ntBASIC18.78■□□□□ 0.6
NDNQ99608 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NDNQ99608 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.78■□□□□ 0.6
NDNQ99608 AL353807.1-201ENST00000427475 662 ntBASIC18.78■□□□□ 0.6
NDNQ99608 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.78■□□□□ 0.6
NDNQ99608 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NDNQ99608 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.78■□□□□ 0.6
NDNQ99608 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.78■□□□□ 0.6
NDNQ99608 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NDNQ99608 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.78■□□□□ 0.6
NDNQ99608 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDNQ99608 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.78■□□□□ 0.6
NDNQ99608 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NDNQ99608 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDNQ99608 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NDNQ99608 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
NDNQ99608 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.77■□□□□ 0.6
NDNQ99608 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.77■□□□□ 0.6
NDNQ99608 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.77■□□□□ 0.6
NDNQ99608 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.77■□□□□ 0.6
NDNQ99608 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.77■□□□□ 0.6
NDNQ99608 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.77■□□□□ 0.6
NDNQ99608 AC008040.2-201ENST00000461049 708 ntBASIC18.77■□□□□ 0.6
NDNQ99608 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.77■□□□□ 0.6
NDNQ99608 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.77■□□□□ 0.6
NDNQ99608 RARRES2P10-201ENST00000564312 460 ntBASIC18.77■□□□□ 0.6
NDNQ99608 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.77■□□□□ 0.6
NDNQ99608 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NDNQ99608 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDNQ99608 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NDNQ99608 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
NDNQ99608 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
NDNQ99608 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NDNQ99608 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms