Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 AC139887.3-201ENST00000568585 713 ntBASIC18.92■□□□□ 0.62
PHOX2BQ99453 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.92■□□□□ 0.62
PHOX2BQ99453 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHOX2BQ99453 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 NUS1P2-201ENST00000417358 873 ntBASIC18.91■□□□□ 0.62
PHOX2BQ99453 IGHV3-47-201ENST00000425060 335 ntBASIC18.91■□□□□ 0.62
PHOX2BQ99453 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 SCARNA2-201ENST00000458748 420 ntBASIC18.91■□□□□ 0.62
PHOX2BQ99453 CYMP-203ENST00000474680 1263 ntBASIC18.91■□□□□ 0.62
PHOX2BQ99453 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 NIFKP4-201ENST00000567275 1192 ntBASIC18.91■□□□□ 0.62
PHOX2BQ99453 AL356488.2-201ENST00000602755 427 ntBASIC18.91■□□□□ 0.62
PHOX2BQ99453 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHOX2BQ99453 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.91■□□□□ 0.62
PHOX2BQ99453 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PHOX2BQ99453 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.9■□□□□ 0.62
PHOX2BQ99453 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PHOX2BQ99453 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PHOX2BQ99453 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
PHOX2BQ99453 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.9■□□□□ 0.62
PHOX2BQ99453 AC073314.1-201ENST00000568729 2216 ntBASIC18.9■□□□□ 0.62
PHOX2BQ99453 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.9■□□□□ 0.62
PHOX2BQ99453 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.9■□□□□ 0.62
PHOX2BQ99453 KRT16P6-202ENST00000425692 1426 ntBASIC18.9■□□□□ 0.62
PHOX2BQ99453 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHOX2BQ99453 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
PHOX2BQ99453 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PHOX2BQ99453 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PHOX2BQ99453 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PHOX2BQ99453 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PHOX2BQ99453 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PHOX2BQ99453 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PHOX2BQ99453 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
PHOX2BQ99453 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PHOX2BQ99453 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 DNAJB3-202ENST00000449667 1266 ntBASIC18.89■□□□□ 0.61
PHOX2BQ99453 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.89■□□□□ 0.61
PHOX2BQ99453 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 FEM1AP1-201ENST00000431297 1995 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms