Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
IFT140Q96RY7 RPS2P1-201ENST00000434010 821 ntBASIC31.04■■■□□ 2.56
IFT140Q96RY7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
IFT140Q96RY7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
IFT140Q96RY7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC31.04■■■□□ 2.56
IFT140Q96RY7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
IFT140Q96RY7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
IFT140Q96RY7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
IFT140Q96RY7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
IFT140Q96RY7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
IFT140Q96RY7 CYMP-203ENST00000474680 1263 ntBASIC31.03■■■□□ 2.56
IFT140Q96RY7 HS6ST1P1-201ENST00000481504 1234 ntBASIC31.03■■■□□ 2.56
IFT140Q96RY7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC31.03■■■□□ 2.56
IFT140Q96RY7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
IFT140Q96RY7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC31.03■■■□□ 2.56
IFT140Q96RY7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
IFT140Q96RY7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC31.03■■■□□ 2.56
IFT140Q96RY7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC31.03■■■□□ 2.56
IFT140Q96RY7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
IFT140Q96RY7 TP73-AS1-210ENST00000637775 1455 ntBASIC31.02■■■□□ 2.56
IFT140Q96RY7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
IFT140Q96RY7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
IFT140Q96RY7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
IFT140Q96RY7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC31.02■■■□□ 2.56
IFT140Q96RY7 RFPL4AP1-201ENST00000530883 850 ntBASIC31.02■■■□□ 2.56
IFT140Q96RY7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC31.02■■■□□ 2.56
IFT140Q96RY7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC31.02■■■□□ 2.56
IFT140Q96RY7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
IFT140Q96RY7 AC112777.1-201ENST00000540175 1423 ntBASIC31.02■■■□□ 2.56
IFT140Q96RY7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
IFT140Q96RY7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
IFT140Q96RY7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
IFT140Q96RY7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
IFT140Q96RY7 HLA-J-201ENST00000462773 1622 ntBASIC31.02■■■□□ 2.56
IFT140Q96RY7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
IFT140Q96RY7 AC092910.1-201ENST00000482027 1129 ntBASIC31.01■■■□□ 2.56
IFT140Q96RY7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
IFT140Q96RY7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
IFT140Q96RY7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
IFT140Q96RY7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
IFT140Q96RY7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
IFT140Q96RY7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 LBH-203ENST00000404397 543 ntTSL 4 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 AC025062.2-201ENST00000605477 670 ntBASIC31.01■■■□□ 2.55
IFT140Q96RY7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC31.01■■■□□ 2.55
IFT140Q96RY7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
IFT140Q96RY7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC31■■■□□ 2.55
IFT140Q96RY7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC31■■■□□ 2.55
IFT140Q96RY7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC31■■■□□ 2.55
IFT140Q96RY7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
IFT140Q96RY7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
IFT140Q96RY7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
IFT140Q96RY7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC31■■■□□ 2.55
IFT140Q96RY7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
IFT140Q96RY7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
IFT140Q96RY7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
IFT140Q96RY7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC31■■■□□ 2.55
IFT140Q96RY7 AC002347.1-201ENST00000569543 541 ntBASIC31■■■□□ 2.55
IFT140Q96RY7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC31■■■□□ 2.55
IFT140Q96RY7 ANKRD20A8P-203ENST00000641373 517 ntBASIC31■■■□□ 2.55
IFT140Q96RY7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
IFT140Q96RY7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
IFT140Q96RY7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC31■■■□□ 2.55
IFT140Q96RY7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
IFT140Q96RY7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
IFT140Q96RY7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
IFT140Q96RY7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC30.99■■■□□ 2.55
IFT140Q96RY7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
IFT140Q96RY7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC30.99■■■□□ 2.55
IFT140Q96RY7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
IFT140Q96RY7 EP400NL-214ENST00000641289 2402 ntBASIC30.99■■■□□ 2.55
IFT140Q96RY7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
IFT140Q96RY7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
IFT140Q96RY7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
IFT140Q96RY7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
IFT140Q96RY7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC30.98■■■□□ 2.55
IFT140Q96RY7 AL162377.1-201ENST00000618844 1793 ntBASIC30.98■■■□□ 2.55
IFT140Q96RY7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
IFT140Q96RY7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
IFT140Q96RY7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC30.98■■■□□ 2.55
IFT140Q96RY7 METTL21AP1-201ENST00000438852 635 ntBASIC30.98■■■□□ 2.55
IFT140Q96RY7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC30.98■■■□□ 2.55
IFT140Q96RY7 AC008735.5-201ENST00000623544 497 ntBASIC30.98■■■□□ 2.55
IFT140Q96RY7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms