Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC093909.1-201ENST00000504731 1122 ntBASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 AP005212.1-201ENST00000581547 1997 ntBASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 YBX2P1-201ENST00000394192 760 ntBASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 METTL21AP1-201ENST00000438852 635 ntBASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD1Q96PZ7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 SPCS2P1-201ENST00000561636 679 ntBASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD1Q96PZ7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 RPS8P6-201ENST00000426177 609 ntBASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 MIR3917-201ENST00000580971 93 ntBASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD1Q96PZ7 ZNF259P1-201ENST00000407656 1365 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms