Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.74■□□□□ 0.43
COL21A1Q96P44 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.74■□□□□ 0.43
COL21A1Q96P44 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 AL355355.2-201ENST00000442321 338 ntBASIC17.73■□□□□ 0.43
COL21A1Q96P44 SNORA78-201ENST00000459373 127 ntBASIC17.73■□□□□ 0.43
COL21A1Q96P44 Z85996.1-201ENST00000494644 937 ntBASIC17.73■□□□□ 0.43
COL21A1Q96P44 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 AC093525.10-201ENST00000625130 1569 ntBASIC17.73■□□□□ 0.43
COL21A1Q96P44 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL21A1Q96P44 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL21A1Q96P44 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 Z98044.1-201ENST00000632503 1764 ntBASIC17.72■□□□□ 0.43
COL21A1Q96P44 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 TSPY7P-201ENST00000431358 1114 ntBASIC17.72■□□□□ 0.43
COL21A1Q96P44 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 NUDT16P1-203ENST00000513809 620 ntBASIC17.72■□□□□ 0.43
COL21A1Q96P44 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 MIR4785-201ENST00000585005 73 ntBASIC17.72■□□□□ 0.43
COL21A1Q96P44 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 AC026471.5-201ENST00000615068 467 ntBASIC17.72■□□□□ 0.43
COL21A1Q96P44 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL21A1Q96P44 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL21A1Q96P44 AL512353.2-201ENST00000448759 1962 ntBASIC17.71■□□□□ 0.43
COL21A1Q96P44 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 MIR4497-201ENST00000583208 89 ntBASIC17.71■□□□□ 0.43
COL21A1Q96P44 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL21A1Q96P44 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.71■□□□□ 0.43
COL21A1Q96P44 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms