Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 HEIH-201ENST00000623091 1652 ntBASIC20.23■□□□□ 0.83
SNX27Q96L92 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SNX27Q96L92 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.23■□□□□ 0.83
SNX27Q96L92 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.23■□□□□ 0.83
SNX27Q96L92 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.23■□□□□ 0.83
SNX27Q96L92 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.23■□□□□ 0.83
SNX27Q96L92 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SNX27Q96L92 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.22■□□□□ 0.83
SNX27Q96L92 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
SNX27Q96L92 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.22■□□□□ 0.83
SNX27Q96L92 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.22■□□□□ 0.83
SNX27Q96L92 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.22■□□□□ 0.83
SNX27Q96L92 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.22■□□□□ 0.83
SNX27Q96L92 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.22■□□□□ 0.83
SNX27Q96L92 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.22■□□□□ 0.83
SNX27Q96L92 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SNX27Q96L92 HYMAI.1-201ENST00000620949 238 ntBASIC20.22■□□□□ 0.83
SNX27Q96L92 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SNX27Q96L92 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.22■□□□□ 0.83
SNX27Q96L92 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SNX27Q96L92 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SNX27Q96L92 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX27Q96L92 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
SNX27Q96L92 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 HOXB1-202ENST00000577092 1414 ntBASIC20.21■□□□□ 0.83
SNX27Q96L92 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.21■□□□□ 0.83
SNX27Q96L92 KRT18P23-201ENST00000435622 1283 ntBASIC20.21■□□□□ 0.83
SNX27Q96L92 AC112907.2-201ENST00000448639 330 ntBASIC20.21■□□□□ 0.83
SNX27Q96L92 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.21■□□□□ 0.83
SNX27Q96L92 RASA4DP-201ENST00000460726 1199 ntBASIC20.21■□□□□ 0.83
SNX27Q96L92 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.21■□□□□ 0.83
SNX27Q96L92 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.21■□□□□ 0.83
SNX27Q96L92 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.21■□□□□ 0.83
SNX27Q96L92 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SNX27Q96L92 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.21■□□□□ 0.83
SNX27Q96L92 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.21■□□□□ 0.83
SNX27Q96L92 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX27Q96L92 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.2■□□□□ 0.82
SNX27Q96L92 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SNX27Q96L92 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SNX27Q96L92 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SNX27Q96L92 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.2■□□□□ 0.82
SNX27Q96L92 AC034232.1-201ENST00000506026 1064 ntBASIC20.2■□□□□ 0.82
SNX27Q96L92 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 AC083849.1-201ENST00000615227 514 ntBASIC20.2■□□□□ 0.82
SNX27Q96L92 AC139530.3-201ENST00000620344 690 ntBASIC20.2■□□□□ 0.82
SNX27Q96L92 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.2■□□□□ 0.82
SNX27Q96L92 AL121956.5-201ENST00000625261 221 ntBASIC20.2■□□□□ 0.82
SNX27Q96L92 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 AC083906.6-201ENST00000641366 219 ntBASIC20.2■□□□□ 0.82
SNX27Q96L92 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX27Q96L92 MTMR9LP-203ENST00000426597 1545 ntBASIC20.2■□□□□ 0.82
SNX27Q96L92 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms