Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 BX088651.1-201ENST00000540551 451 ntBASIC19.14■□□□□ 0.65
RTP4Q96DX8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 DGCR10-201ENST00000609839 495 ntBASIC19.14■□□□□ 0.65
RTP4Q96DX8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.14■□□□□ 0.65
RTP4Q96DX8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 NOC2LP1-202ENST00000452600 2235 ntBASIC19.14■□□□□ 0.65
RTP4Q96DX8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTP4Q96DX8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 AC007613.1-201ENST00000572811 2597 ntBASIC19.13■□□□□ 0.65
RTP4Q96DX8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTP4Q96DX8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTP4Q96DX8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 AC008622.2-201ENST00000617006 1229 ntBASIC19.13■□□□□ 0.65
RTP4Q96DX8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 AC113410.3-201ENST00000623366 203 ntBASIC19.13■□□□□ 0.65
RTP4Q96DX8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTP4Q96DX8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTP4Q96DX8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTP4Q96DX8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTP4Q96DX8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTP4Q96DX8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.12■□□□□ 0.65
RTP4Q96DX8 MIR4785-201ENST00000585005 73 ntBASIC19.12■□□□□ 0.65
RTP4Q96DX8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTP4Q96DX8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.11■□□□□ 0.65
RTP4Q96DX8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 NUDT16P1-203ENST00000513809 620 ntBASIC19.11■□□□□ 0.65
RTP4Q96DX8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 LINC01023-201ENST00000606054 436 ntBASIC19.11■□□□□ 0.65
RTP4Q96DX8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RTP4Q96DX8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTP4Q96DX8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
RTP4Q96DX8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms