Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 AC134684.3-201ENST00000641758 218 ntBASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL22A1Q8NFW1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 AC021087.4-201ENST00000563761 564 ntBASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 AC006333.2-201ENST00000607957 2099 ntBASIC25.02■■□□□ 1.6
COL22A1Q8NFW1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 AC132008.2-207ENST00000454517 770 ntBASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 SART3-203ENST00000546611 1184 ntBASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 MTDHP3-201ENST00000594186 672 ntBASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 AL162377.1-201ENST00000618844 1793 ntBASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 HS6ST1P1-201ENST00000481504 1234 ntBASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
COL22A1Q8NFW1 EP400NL-214ENST00000641289 2402 ntBASIC25■■□□□ 1.59
COL22A1Q8NFW1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL22A1Q8NFW1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL22A1Q8NFW1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC25■■□□□ 1.59
COL22A1Q8NFW1 RPS8P6-201ENST00000426177 609 ntBASIC25■■□□□ 1.59
COL22A1Q8NFW1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL22A1Q8NFW1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL22A1Q8NFW1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25■■□□□ 1.59
COL22A1Q8NFW1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25■■□□□ 1.59
COL22A1Q8NFW1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC25■■□□□ 1.59
COL22A1Q8NFW1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL22A1Q8NFW1 AC026310.3-201ENST00000625186 2373 ntBASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 AL512408.1-201ENST00000569378 2000 ntBASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 MIR3197-201ENST00000582241 73 ntBASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL22A1Q8NFW1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 RPS2P1-201ENST00000434010 821 ntBASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 RNA5SP415-201ENST00000517246 115 ntBASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 AC112777.1-201ENST00000540175 1423 ntBASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
COL22A1Q8NFW1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL22A1Q8NFW1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
COL22A1Q8NFW1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC24.97■■□□□ 1.59
COL22A1Q8NFW1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms