Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.68■□□□□ 0.9
KLHDC9Q8NEP7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.68■□□□□ 0.9
KLHDC9Q8NEP7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHDC9Q8NEP7 AL353692.3-201ENST00000407031 1396 ntBASIC20.68■□□□□ 0.9
KLHDC9Q8NEP7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHDC9Q8NEP7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.68■□□□□ 0.9
KLHDC9Q8NEP7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
KLHDC9Q8NEP7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 AL157384.1-201ENST00000445995 2473 ntBASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 AL590627.1-203ENST00000421194 1026 ntBASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 TP73-AS1-207ENST00000624167 988 ntBASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KLHDC9Q8NEP7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC9Q8NEP7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 AP000593.1-201ENST00000393668 712 ntBASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 VENTXP7-201ENST00000475503 772 ntBASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.65■□□□□ 0.9
KLHDC9Q8NEP7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
KLHDC9Q8NEP7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
KLHDC9Q8NEP7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.64■□□□□ 0.9
KLHDC9Q8NEP7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KLHDC9Q8NEP7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KLHDC9Q8NEP7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.64■□□□□ 0.9
KLHDC9Q8NEP7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KLHDC9Q8NEP7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 NUS1P2-201ENST00000417358 873 ntBASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 POM121L3P-201ENST00000419331 1163 ntBASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 AC064862.7-201ENST00000604520 867 ntBASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 AC068587.9-201ENST00000641814 219 ntBASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 IRX1P1-201ENST00000438849 1838 ntBASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms