Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 KRT8P32-201ENST00000512863 1461 ntBASIC16.41■□□□□ 0.22
CPEB3Q8NE35 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.41■□□□□ 0.22
CPEB3Q8NE35 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.4■□□□□ 0.22
CPEB3Q8NE35 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 AL023803.3-201ENST00000615559 522 ntBASIC16.4■□□□□ 0.22
CPEB3Q8NE35 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CPEB3Q8NE35 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CPEB3Q8NE35 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 SLC25A1P2-201ENST00000430693 912 ntBASIC16.39■□□□□ 0.21
CPEB3Q8NE35 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 AC073912.3-201ENST00000624414 853 ntBASIC16.39■□□□□ 0.21
CPEB3Q8NE35 AC068587.9-201ENST00000641814 219 ntBASIC16.39■□□□□ 0.21
CPEB3Q8NE35 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 HEIH-201ENST00000623091 1652 ntBASIC16.39■□□□□ 0.21
CPEB3Q8NE35 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.39■□□□□ 0.21
CPEB3Q8NE35 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 C2orf69P3-201ENST00000565542 1120 ntBASIC16.38■□□□□ 0.21
CPEB3Q8NE35 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 AC010947.1-201ENST00000623454 693 ntBASIC16.38■□□□□ 0.21
CPEB3Q8NE35 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPEB3Q8NE35 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms