Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 AC010203.1-204ENST00000548782 407 ntBASIC19.2■□□□□ 0.66
RTL3Q8N8U3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.2■□□□□ 0.66
RTL3Q8N8U3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RTL3Q8N8U3 ANO7L1-203ENST00000602586 1720 ntBASIC19.2■□□□□ 0.66
RTL3Q8N8U3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 TERF1P1-201ENST00000311003 1181 ntBASIC19.19■□□□□ 0.66
RTL3Q8N8U3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 AL138966.2-201ENST00000621997 464 ntBASIC19.19■□□□□ 0.66
RTL3Q8N8U3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RTL3Q8N8U3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL3Q8N8U3 AC034236.2-201ENST00000606662 1610 ntBASIC19.18■□□□□ 0.66
RTL3Q8N8U3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL3Q8N8U3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL3Q8N8U3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms