Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AK4P3-201ENST00000418260 669 ntBASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AL441883.1-201ENST00000566170 1045 ntBASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AC011558.1-201ENST00000623459 338 ntBASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 AC034236.2-201ENST00000606662 1610 ntBASIC17.29■□□□□ 0.36
C9orf40Q8IXQ3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 DUX4L26-201ENST00000489078 1255 ntBASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf40Q8IXQ3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 AC087289.5-201ENST00000586076 3175 ntBASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 KRT18P23-201ENST00000435622 1283 ntBASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 GCSHP2-201ENST00000560971 527 ntBASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 AC024243.1-201ENST00000609234 778 ntBASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 AC112497.1-201ENST00000624824 639 ntBASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 AL031432.5-201ENST00000641059 760 ntBASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf40Q8IXQ3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
C9orf40Q8IXQ3 CROCCP3-202ENST00000420820 1947 ntBASIC17.27■□□□□ 0.35
C9orf40Q8IXQ3 AC093525.10-201ENST00000625130 1569 ntBASIC17.27■□□□□ 0.35
C9orf40Q8IXQ3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C9orf40Q8IXQ3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms